Commit 52ce6f91 authored by Carina Lansing's avatar Carina Lansing
Browse files

Fixed line endings to linux.

parent 1e9bef04
#!/bin/bash
### Job Name
#PBS -N lasso-o
### Account name (project code)
#PBS -A arm
### Specify the group name under which the job is to run.
### If not set, the group_list defaults to the primary group
### of the user under which the job will be run.
#PBS -W group_list=cades-arm
### Max time limit
#PBS -l walltime=01:00:00
### Queue
#PBS -q arm_high_mem
### Merge & persist std output and std error files
#PBS -j oe
#PBS -k eod
### Request 1 node with 1 processor per node
#PBS -l nodes=1:ppn=1
### A QoS is a classification that determines what kind of resources your job can use.
#PBS -l qos=std
./run.sh
#!/bin/bash
### Job Name
#PBS -N lasso-o
### Account name (project code)
#PBS -A arm
### Specify the group name under which the job is to run.
### If not set, the group_list defaults to the primary group
### of the user under which the job will be run.
#PBS -W group_list=cades-arm
### Max time limit
#PBS -l walltime=01:00:00
### Queue
#PBS -q arm_high_mem
### Merge & persist std output and std error files
#PBS -j oe
#PBS -k eod
### Request 1 node with 1 processor per node
#PBS -l nodes=1:ppn=1
### A QoS is a classification that determines what kind of resources your job can use.
#PBS -l qos=std
./run.sh
......@@ -113,14 +113,10 @@ run_shifter() {
shifter \
--env=BEGIN_DATETIME=20180710.115900 \
--volume=/global/homes/c/carinal/run-lasso-o_shcu/data/inputs:/data/lasso/inputs \
--volume=/global/homes/c/carinal/run-lasso-o_shcu/data/outputs:/data/lasso/outputs \
--volume=/global/cscratch1/sd/carinal/test-in:/data/lasso/inputs \
--volume=/global/cscratch1/sd/carinal/test-out:/data/lasso/outputs \
--image=docker:registry.gitlab.com/gov-doe-arm/docker/lasso-o_shcu -- /apps/base/python3.6/bin/python /bin/run_lasso.py
# /apps/base/python3.6/bin/python /bin/run_lasso.py
#srun -C gpu shifter run --mount=type=bind,source=$HOME,destination=$HOME debian ls -l $HOME
}
argument="$1"
......
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